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Publications

We insist on maintaining the highest scientific rigour and integrity in everything we do. These publications provide insight into some of the discoveries and advances that are at the core of our work.

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Peer-reviewed paper

Scientific article

White paper

A.Prof Lutz Krause

Genome discovery

Genome-based taxonomy

MCP in use

Metagenomic analysis

Microbiome studies

Prof Gene Tyson

Prof Philip Hugenholtz

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Scientific article Sep 7, 2022 Journal of Renal Nutrition

MCP in use

McFarlane C, Krishnasamy R, Stanton T, Savill E, Snelson M, Mihala G, Morrison M, Johnson DW, Campbell KL, doi: 10.1053/j.jrn.2021.10.003.

Scientific article Aug 17, 2022 Frontiers in Microbiology

MCP in use

Sindi AS, Stinson LF, Lean SS, Chooi YH, Leghi GE, Netting MJ, Wlodek ME, Muhlhausler BS, Geddes DT, Payne MS. doi: 10.3389/fmicb.2022.900702.

Scientific article Jul 7, 2022 Journal of Pediatrics

MCP in use

Westaway JAF, Huerlimann R, Kandasamy Y, Miller CM, Norton R, Watson D, Infante-Vilamil S, Rudd D. doi: 10.1007/s00431-022-04548-y.

Mar 7, 2022 Frontiers in Microbiology

MCP in use

Jacob A. F. Westaway, Roger Huerlimann, Yoga Kandasamy, Catherine M. Miller, Robert Norton, David Watson, Sandra Infante-Vilamil and Donna Rudd, doi.org/10.3389/fped.2022.838559

Scientific article Dec 15, 2021 Nutrients

MCP in use

McFarlane C, Krishnasamy R, Stanton T, Savill E, Snelson M, Mihala G, Kelly JT, Morrison M, Johnson DW, Campbell KL. doi: 10.3390/nu13124481.

Scientific article Nov 11, 2021 Cell

MCP in use

Chloe X. Yap, Anjali K. Henders, Gail A. Alvares, ..., Andrew J.O. Whitehouse, Naomi R. Wray, Jacob Gratten, doi: 10.1016/j.cell.2021.10.015.

Peer-reviewed paper Sep 11, 2017 Nature Microbiology

Genome discovery

Prof Gene Tyson

Prof Philip Hugenholtz

Parks DH, Rinke C, Chuvochina M, ..., Hugenholtz P, Tyson GW. doi: 10.1038/s41564-017-0012-7

Peer-reviewed paper Aug 1, 2017 Nature Biotechnology

Genome discovery

Prof Philip Hugenholtz

Bowers RM, Kyrpides NC, Stepanauskas R, ..., Hugenholtz P, Woyke T. doi: 10.1038/nbt.3893

Peer-reviewed paper May 26, 2013 Nature Biotechnology

Genome discovery

Prof Gene Tyson

Prof Philip Hugenholtz

Albertsen M, Hugenholtz P, Skarshewski A, ..., Tyson GW, Nielsen P. doi: 10.1038/nbt.2579

Publications

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Diet Quality and Protein-Bound Uraemic Toxins: Investigation of Novel Risk Factors and the Role of Microbiome in Chronic Kidney Disease

Effect of a reduced fat and sugar maternal dietary intervention during lactation on the infant gut microbiome

Exploring the long-term colonisation and persistence of probiotic-prophylaxis species on the gut microbiome of preterm infants: a pilot study

To Probiotic or Not to Probiotic: A Metagenomic Comparison of the Discharge Gut Microbiome of Infants Supplemented With Probiotics in NICU and Those Who Are Not

Synbiotics Easing Renal Failure by Improving Gut Microbiology II (SYNERGY II): A Feasibility Randomized Controlled Trial

Autism-related dietary preferences mediate autism-gut microbiome associations

Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes